STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheXChemotaxis protein CheX. (155 aa)    
Predicted Functional Partners:
cheY-2
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
 
 
 
 0.962
AFV06917.1
Hypothetical protein.
   
 0.944
cheY
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
 
 
  0.923
cheY-3
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
  
 
 0.908
cheY-4
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
  
 
 0.908
AFV06328.1
Response regulator receiver protein.
   
 
  0.903
AFV06915.1
Hypothetical protein.
 
     0.706
AFV04750.1
Sensor protein barA.
 
 
 
 0.657
AFV04712.1
Chemotaxis protein CheV.
   
 
 0.607
AFV06329.1
Sensory box histidine kinase/response regulator.
 
 
 
 0.587
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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