STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV06273.1ABC transporter ATP-binding protein. (255 aa)    
Predicted Functional Partners:
AFV06274.1
ABC transporter permease protein.
 
 0.995
AFV04689.1
ABC transporter, permease protein.
 
 0.974
AFV06678.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.972
AFV06272.1
Histidine kinase.
 
   
 0.913
pstB
Phosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 
  
0.904
AFV04788.1
ABC transporter, ATP-binding/permease protein.
 
    
0.904
AFV04727.1
Lipid A export ATP-binding/permease protein MsbA.
 
     
0.899
AFV06271.1
Sensory transduction protein yxdJ.
 
     0.882
AFV06783.1
ABC-type multidrug/protein/lipid transport system, ATPase component.
 
     
0.828
AFV05118.1
Putative ABC transporter.
 
     
0.791
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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