STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV04268.1ABC-type multidrug transport system, permease component. (371 aa)    
Predicted Functional Partners:
AFV04266.1
ABC transporter multidrug efflux pump, fused ATP-binding domains.
    0.996
AFV04267.1
ABC-type multidrug transport system, ATPase component.
    0.995
yfiL
ABC-type multidrug transport system, ATPase component.
    0.950
AFV04816.1
ABC transporter related protein.
    0.949
AFV06355.1
ABC transporter, ATP-binding protein.
    0.948
AFV06445.1
Daunorubicin resistance ATP-binding protein.
    0.946
AFV06442.1
ABC transporter related protein.
    0.938
AFV04265.1
Secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.937
AFV05227.1
ABC transporter, ATP-binding protein.
 
    0.926
AFV06526.1
ABC transporter, ATP-binding protein.
 
    0.925
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.