STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV06833.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
AFV06834.1
Potassium uptake protein TrkH.
       0.596
AFV06835.1
Trk system potassium uptake protein TrkA.
       0.573
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.536
AFV06836.1
Sodium-dependent phosphate transporter.
       0.403
whiA
Cytoplasmic hypothetical protein DUF199, a subgroup; Involved in cell division and chromosome segregation.
       0.403
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.