Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV04298.1 | AFV04300.1 | DCF50_p292 | DCF50_p294 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Formiminotetrahydrofolate cyclodeaminase. | 0.596 |
| AFV04298.1 | AFV04303.1 | DCF50_p292 | DCF50_p297 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 5,10-methylenetetrahydrofolate reductase. | 0.864 |
| AFV04298.1 | cooS1 | DCF50_p292 | DCF50_p290 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Carbon monoxide dehydrogenase CooS subunit. | 0.455 |
| AFV04298.1 | fhs | DCF50_p292 | DCF50_p295 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.680 |
| AFV04298.1 | folD | DCF50_p292 | DCF50_p293 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.546 |
| AFV04300.1 | AFV04298.1 | DCF50_p294 | DCF50_p292 | Formiminotetrahydrofolate cyclodeaminase. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.596 |
| AFV04300.1 | AFV04303.1 | DCF50_p294 | DCF50_p297 | Formiminotetrahydrofolate cyclodeaminase. | 5,10-methylenetetrahydrofolate reductase. | 0.639 |
| AFV04300.1 | AFV05629.1 | DCF50_p294 | DCF50_p1627 | Formiminotetrahydrofolate cyclodeaminase. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.920 |
| AFV04300.1 | AFV06913.1 | DCF50_p294 | DCF50_p2910 | Formiminotetrahydrofolate cyclodeaminase. | Serine--glyoxylate aminotransferase. | 0.652 |
| AFV04300.1 | cooS1 | DCF50_p294 | DCF50_p290 | Formiminotetrahydrofolate cyclodeaminase. | Carbon monoxide dehydrogenase CooS subunit. | 0.580 |
| AFV04300.1 | fhs | DCF50_p294 | DCF50_p295 | Formiminotetrahydrofolate cyclodeaminase. | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.980 |
| AFV04300.1 | fmt | DCF50_p294 | DCF50_p2189 | Formiminotetrahydrofolate cyclodeaminase. | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.913 |
| AFV04300.1 | folD | DCF50_p294 | DCF50_p293 | Formiminotetrahydrofolate cyclodeaminase. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.993 |
| AFV04300.1 | purH | DCF50_p294 | DCF50_p2195 | Formiminotetrahydrofolate cyclodeaminase. | IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.904 |
| AFV04300.1 | purN | DCF50_p294 | DCF50_p2196 | Formiminotetrahydrofolate cyclodeaminase. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.910 |
| AFV04303.1 | AFV04298.1 | DCF50_p297 | DCF50_p292 | 5,10-methylenetetrahydrofolate reductase. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.864 |
| AFV04303.1 | AFV04300.1 | DCF50_p297 | DCF50_p294 | 5,10-methylenetetrahydrofolate reductase. | Formiminotetrahydrofolate cyclodeaminase. | 0.639 |
| AFV04303.1 | cooS1 | DCF50_p297 | DCF50_p290 | 5,10-methylenetetrahydrofolate reductase. | Carbon monoxide dehydrogenase CooS subunit. | 0.548 |
| AFV04303.1 | fhs | DCF50_p297 | DCF50_p295 | 5,10-methylenetetrahydrofolate reductase. | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.810 |
| AFV04303.1 | folD | DCF50_p297 | DCF50_p293 | 5,10-methylenetetrahydrofolate reductase. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.992 |
page 1 of 4