Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV04906.1 | gidB | DCF50_p899 | DCF50_p2977 | GTP pyrophosphokinase, (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | rRNA small subunit methyltransferase, glucose inhibited division protein GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.602 |
| AFV04906.1 | rnpA | DCF50_p899 | DCF50_p2983 | GTP pyrophosphokinase, (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.401 |
| AFV06983.1 | AFV06984.1 | DCF50_p2980 | DCF50_p2981 | RNA-binding protein Jag. | Inner membrane protein translocase component YidC, short form OxaI-like protein. | 0.948 |
| AFV06983.1 | AFV06985.1 | DCF50_p2980 | DCF50_p2982 | RNA-binding protein Jag. | Protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.929 |
| AFV06983.1 | gidA | DCF50_p2980 | DCF50_p2978 | RNA-binding protein Jag. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.701 |
| AFV06983.1 | gidB | DCF50_p2980 | DCF50_p2977 | RNA-binding protein Jag. | rRNA small subunit methyltransferase, glucose inhibited division protein GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.887 |
| AFV06983.1 | mnmE | DCF50_p2980 | DCF50_p2979 | RNA-binding protein Jag. | GTPase and tRNA-U34 5-formylation enzyme TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.730 |
| AFV06983.1 | parA-2 | DCF50_p2980 | DCF50_p2976 | RNA-binding protein Jag. | Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj. | 0.407 |
| AFV06983.1 | parB-2 | DCF50_p2980 | DCF50_p2975 | RNA-binding protein Jag. | Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J; Belongs to the ParB family. | 0.507 |
| AFV06983.1 | rnpA | DCF50_p2980 | DCF50_p2983 | RNA-binding protein Jag. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.943 |
| AFV06984.1 | AFV06983.1 | DCF50_p2981 | DCF50_p2980 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | RNA-binding protein Jag. | 0.948 |
| AFV06984.1 | AFV06985.1 | DCF50_p2981 | DCF50_p2982 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | Protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.943 |
| AFV06984.1 | gidA | DCF50_p2981 | DCF50_p2978 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.802 |
| AFV06984.1 | gidB | DCF50_p2981 | DCF50_p2977 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | rRNA small subunit methyltransferase, glucose inhibited division protein GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.786 |
| AFV06984.1 | mnmE | DCF50_p2981 | DCF50_p2979 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | GTPase and tRNA-U34 5-formylation enzyme TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.739 |
| AFV06984.1 | parA-2 | DCF50_p2981 | DCF50_p2976 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj. | 0.439 |
| AFV06984.1 | parB-2 | DCF50_p2981 | DCF50_p2975 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J; Belongs to the ParB family. | 0.494 |
| AFV06984.1 | rnpA | DCF50_p2981 | DCF50_p2983 | Inner membrane protein translocase component YidC, short form OxaI-like protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.965 |
| AFV06985.1 | AFV06983.1 | DCF50_p2982 | DCF50_p2980 | Protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | RNA-binding protein Jag. | 0.929 |
| AFV06985.1 | AFV06984.1 | DCF50_p2982 | DCF50_p2981 | Protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Inner membrane protein translocase component YidC, short form OxaI-like protein. | 0.943 |
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