STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV04338.1Sporulation protein YabP. (92 aa)    
Predicted Functional Partners:
AFV04339.1
Spore cortex protein YabQ (Spore_YabQ).
  
  
 0.908
spoVT
Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT).
 
     0.849
AFV04534.1
Stage IV sporulation protein B.
  
   
 0.806
spoIIE
Stage II sporulation serine phosphatase for sigma-F activation (SpoIIE).
 
     0.802
AFV05047.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.780
gpr
Endopeptidase spore protease Gpr; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.776
spoVAF
Stage V sporulation protein AF (SpoVAF).
  
   
 0.776
spoVAD
Stage V sporulation protein AD (SpoVAD).
  
     0.774
spoVAC
Stage V sporulation protein AC (SpoVAC).
  
     0.772
AFV04337.1
S4-domain-containing heat shock protein.
  
    0.771
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.