STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV04400.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
AFV04275.1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.938
AFV06743.1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.919
sucC
Succinyl-CoA ligase [ADP-forming] beta chain.
  
  
 0.787
sucD2
Succinyl-CoA ligase [ADP-forming] alpha chain.
  
  
 0.608
AFV05618.1
Putative NAD(FAD)-dependent dehydrogenase; Belongs to the sulfur carrier protein TusA family.
     
 0.541
AFV04402.1
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
       0.509
hymB-2
Putative iron-only hydrogenase, electron-transferring subunit HymB.
  
 
 0.439
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.421
AFV04397.1
N-acetylglutamate synthase; Belongs to the acetyltransferase family.
       0.418
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.