STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV04854.1Two-component response regulator. (225 aa)    
Predicted Functional Partners:
AFV04853.1
His Kinase A (phosphoacceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   0.965
AFV04750.1
Sensor protein barA.
 
 
 0.917
AFV06329.1
Sensory box histidine kinase/response regulator.
 
 
 0.894
AFV06435.1
Two-component hybrid histidine kinase.
 
 
0.879
AFV04851.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
     0.860
AFV06446.1
Sensor histidine kinase.
   0.819
AFV04852.1
ABC-type antimicrobial peptide transport system, ATPase component.
 
     0.763
AFV06746.1
Periplasmic sensor signal transduction histidine kinase.
   0.736
AFV05727.1
Sensor histidine kinase.
 
 0.700
AFV06905.1
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
  
     0.699
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.