STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV04984.12-oxoglutarate oxidoreductase, beta subunit. (247 aa)    
Predicted Functional Partners:
AFV04275.1
Pyruvate-flavodoxin oxidoreductase.
  
 0.999
AFV06743.1
Pyruvate-flavodoxin oxidoreductase.
  
 0.999
AFV04983.1
2-oxoglutarate oxidoreductase, gamma subunit.
 0.999
AFV04985.1
2-oxoglutarate oxidoreductase, alpha subunit.
 0.999
AFV04986.1
2-oxoglutarate oxidoreductase, delta subunit, putative.
 
 
 0.995
AFV04987.1
Hypothetical protein.
 
     0.956
AFV04981.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 
 0.949
AFV06287.1
Pyruvate formate-lyase.
     
 0.932
AFV04660.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.923
AFV04740.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 
 0.918
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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