STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZO_01797Spore germination protein; Overlaps another CDS with the same product name. (360 aa)    
Predicted Functional Partners:
BAZO_01802
Spore germination protein; Overlaps another CDS with the same product name.
 
  
 0.958
BAZO_01807
Spore germination protein.
 
  
 0.915
BAZO_08556
Hypothetical protein.
  
     0.631
BAZO_16914
Hypothetical protein.
  
     0.603
BAZO_19823
Spore germination protein YndE.
 
  
 0.570
BAZO_01952
Spore germination protein; COG1115 Na+/alanine symporter.
 
  
 0.553
tlp
Small acid-soluble spore protein Tlp; Belongs to the Tlp family.
  
     0.552
BAZO_19818
Germination protein, Ger(x)C family.
  
   
 0.546
BAZO_16474
Hypothetical protein.
  
     0.489
BAZO_01942
Germination protein, Ger(x)C family.
  
   
 0.481
Your Current Organism:
Bacillus azotoformans
NCBI taxonomy Id: 1131731
Other names: B. azotoformans LMG 9581, Bacillus azotoformans ATCC 29788, Bacillus azotoformans IFO 15712, Bacillus azotoformans LMG 9581, Bacillus azotoformans NBRC 15712, Bacillus azotoformans str. LMG 9581, Bacillus azotoformans strain LMG 9581
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