STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ61877.1COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF. (327 aa)    
Predicted Functional Partners:
EHQ61995.1
COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
    
  0.787
EHQ60599.1
COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
    
  0.680
EHQ62505.1
Germination-specific N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase); COG0860 N-acetylmuramoyl-L-alanine amidase.
  
  
  0.559
EHQ61878.1
Hypothetical protein.
       0.496
EHQ61994.1
COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
    
  0.494
Your Current Organism:
Paenibacillus dendritiformis
NCBI taxonomy Id: 1131935
Other names: P. dendritiformis C454, Paenibacillus dendritiformis C454, Paenibacillus dendritiformis str. C454, Paenibacillus dendritiformis strain C454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.