STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ59582.1Glycosyl transferase family protein; COG0744 Membrane carboxypeptidase (penicillin-binding protein). (1043 aa)    
Predicted Functional Partners:
EHQ63325.1
Peptidoglycan glycosyltransferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 0.911
EHQ62305.1
Cell wall hydrolase/autolysin; COG0860 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.910
EHQ61747.1
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.902
EHQ62245.1
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.872
EHQ61649.1
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; COG1876 D-alanyl-D-alanine carboxypeptidase.
     
 0.864
EHQ63347.1
COG3599 Cell division initiation protein.
   
 
 0.835
EHQ60293.1
Penicillin-binding protein, 1A family; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
 
0.835
EHQ59325.1
COG3599 Cell division initiation protein.
   
 
 0.835
EHQ63401.1
Penicillin-binding protein, 1A family; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
 
0.833
EHQ63326.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.780
Your Current Organism:
Paenibacillus dendritiformis
NCBI taxonomy Id: 1131935
Other names: P. dendritiformis C454, Paenibacillus dendritiformis C454, Paenibacillus dendritiformis str. C454, Paenibacillus dendritiformis strain C454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.