AC579_7206 protein (Pseudocercospora musae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AC579_7206

Chitin synthase; Plays a major role in cell wall biogenesis. (902 aa)

Predicted Functional Partners:

AC579_8963

0.899

AC579_1718

0.894

AC579_964

0.640

AC579_10426

0.612

AC579_1618

0.579

AC579_9739

0.544

AC579_9730

0.541

AC579_3033

0.510

AC579_9189

0.509

AC579_8485

0.501

Your Current Organism:

Pseudocercospora musae

NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AC579_10426	AC579_1718	A0A139I1H9	A0A139ICE5	Uncharacterized protein.	Uncharacterized protein.	0.891
AC579_10426	AC579_3033	A0A139I1H9	A0A139I4B9	Uncharacterized protein.	UBA domain-containing protein.	0.510
AC579_10426	AC579_7206	A0A139I1H9	A0A139GT65	Uncharacterized protein.	Chitin synthase; Plays a major role in cell wall biogenesis.	0.612
AC579_10426	AC579_8485	A0A139I1H9	A0A139I3X1	Uncharacterized protein.	Glucosamine-6-phosphate isomerase.	0.502
AC579_10426	AC579_964	A0A139I1H9	A0A139IUH2	Uncharacterized protein.	Uncharacterized protein.	0.415
AC579_10426	AC579_9730	A0A139I1H9	A0A139I5Q0	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.525
AC579_10426	AC579_9739	A0A139I1H9	A0A139I5I6	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.543
AC579_1618	AC579_1718	A0A139HHH1	A0A139ICE5	Uncharacterized protein.	Uncharacterized protein.	0.652
AC579_1618	AC579_3033	A0A139HHH1	A0A139I4B9	Uncharacterized protein.	UBA domain-containing protein.	0.510
AC579_1618	AC579_7206	A0A139HHH1	A0A139GT65	Uncharacterized protein.	Chitin synthase; Plays a major role in cell wall biogenesis.	0.579
AC579_1618	AC579_8485	A0A139HHH1	A0A139I3X1	Uncharacterized protein.	Glucosamine-6-phosphate isomerase.	0.502
AC579_1618	AC579_964	A0A139HHH1	A0A139IUH2	Uncharacterized protein.	Uncharacterized protein.	0.415
AC579_1618	AC579_9730	A0A139HHH1	A0A139I5Q0	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.480
AC579_1618	AC579_9739	A0A139HHH1	A0A139I5I6	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.480
AC579_1718	AC579_10426	A0A139ICE5	A0A139I1H9	Uncharacterized protein.	Uncharacterized protein.	0.891
AC579_1718	AC579_1618	A0A139ICE5	A0A139HHH1	Uncharacterized protein.	Uncharacterized protein.	0.652
AC579_1718	AC579_7206	A0A139ICE5	A0A139GT65	Uncharacterized protein.	Chitin synthase; Plays a major role in cell wall biogenesis.	0.894
AC579_1718	AC579_8485	A0A139ICE5	A0A139I3X1	Uncharacterized protein.	Glucosamine-6-phosphate isomerase.	0.426
AC579_1718	AC579_9189	A0A139ICE5	A0A139HAU0	Uncharacterized protein.	Uncharacterized protein.	0.890
AC579_1718	AC579_9730	A0A139ICE5	A0A139I5Q0	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.890