STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_9719Uncharacterized protein. (1088 aa)    
Predicted Functional Partners:
AC579_9454
Uncharacterized protein.
    
 0.507
AC579_3586
ERCC4 domain-containing protein.
    
 0.505
AC579_4487
DNA polymerase.
    
 0.504
AC579_3189
Uncharacterized protein.
  
 
   0.492
AC579_5638
Uncharacterized protein.
    
  0.478
AC579_797
WD_REPEATS_REGION domain-containing protein.
    
  0.463
AC579_3130
Sm domain-containing protein.
    
 0.460
AC579_10595
Small nuclear ribonucleoprotein G.
    
  0.439
AC579_4031
Sm domain-containing protein.
    
  0.431
AC579_8640
Uncharacterized protein.
  
     0.426
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.