STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_3249Uncharacterized protein. (390 aa)    
Predicted Functional Partners:
AC579_1521
PUA domain-containing protein.
    
 0.984
AC579_3132
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
    
 0.968
AC579_6574
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.961
AC579_7527
Uncharacterized protein.
    
 0.921
AC579_782
Uncharacterized protein.
    
 0.880
AC579_1768
Uncharacterized protein.
    
 0.880
AC579_874
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.850
AC579_1207
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 0.732
AC579_9871
Ribosomal_L7Ae domain-containing protein.
    
 0.732
AC579_7500
Uncharacterized protein.
    
 0.732
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.