STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_8895Uncharacterized protein. (176 aa)    
Predicted Functional Partners:
AC579_150
Uncharacterized protein.
   
 
 0.599
AC579_6564
Uncharacterized protein.
   
 
 0.599
AC579_317
Uncharacterized protein.
   
 
 0.599
AC579_4440
Uncharacterized protein.
   
   0.552
AC579_4043
Methyltransf_25 domain-containing protein.
   
 
 0.550
AC579_5362
Uncharacterized protein.
    
 
 0.544
AC579_2204
Nuclear cap-binding protein subunit 2.
   
 
 0.520
AC579_3852
CID domain-containing protein.
   
 
 0.508
AC579_7307
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.410
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
Server load: low (16%) [HD]