AC579_8270 protein (Pseudocercospora musae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AC579_8270

Uncharacterized protein. (538 aa)

Predicted Functional Partners:

AC579_8766

0.999

AC579_8627

0.996

AC579_3675

0.989

AC579_878

0.953

AC579_6035

0.840

AC579_7483

0.836

AC579_6463

0.833

AC579_9569

0.789

AC579_6730

0.782

AC579_696

0.781

Your Current Organism:

Pseudocercospora musae

NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AC579_3675	AC579_6035	A0A139IIS6	A0A139IF08	Tryptophan synthase.	Aminotran_1_2 domain-containing protein.	0.980
AC579_3675	AC579_6463	A0A139IIS6	A0A139IK64	Tryptophan synthase.	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	0.819
AC579_3675	AC579_6730	A0A139IIS6	A0A139H931	Tryptophan synthase.	DHQ_synthase domain-containing protein.	0.714
AC579_3675	AC579_696	A0A139IIS6	A0A139ICK5	Tryptophan synthase.	Aminotran_1_2 domain-containing protein.	0.939
AC579_3675	AC579_7483	A0A139IIS6	A0A139ICP5	Tryptophan synthase.	Chorismate mutase.	0.651
AC579_3675	AC579_8270	A0A139IIS6	A0A139I2B0	Tryptophan synthase.	Uncharacterized protein.	0.989
AC579_3675	AC579_8627	A0A139IIS6	A0A139IFR2	Tryptophan synthase.	Uncharacterized protein.	0.997
AC579_3675	AC579_8766	A0A139IIS6	A0A139IWC2	Tryptophan synthase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.999
AC579_3675	AC579_878	A0A139IIS6	A0A139GYH6	Tryptophan synthase.	Chorismate synthase.	0.980
AC579_3675	AC579_9569	A0A139IIS6	A0A139II89	Tryptophan synthase.	Aspartate aminotransferase.	0.541
AC579_6035	AC579_3675	A0A139IF08	A0A139IIS6	Aminotran_1_2 domain-containing protein.	Tryptophan synthase.	0.980
AC579_6035	AC579_6463	A0A139IF08	A0A139IK64	Aminotran_1_2 domain-containing protein.	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	0.989
AC579_6035	AC579_6730	A0A139IF08	A0A139H931	Aminotran_1_2 domain-containing protein.	DHQ_synthase domain-containing protein.	0.598
AC579_6035	AC579_696	A0A139IF08	A0A139ICK5	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.895
AC579_6035	AC579_7483	A0A139IF08	A0A139ICP5	Aminotran_1_2 domain-containing protein.	Chorismate mutase.	0.890
AC579_6035	AC579_8270	A0A139IF08	A0A139I2B0	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.840
AC579_6035	AC579_8627	A0A139IF08	A0A139IFR2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.876
AC579_6035	AC579_8766	A0A139IF08	A0A139IWC2	Aminotran_1_2 domain-containing protein.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.874
AC579_6035	AC579_878	A0A139IF08	A0A139GYH6	Aminotran_1_2 domain-containing protein.	Chorismate synthase.	0.871
AC579_6035	AC579_9569	A0A139IF08	A0A139II89	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.937