STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_4028GLTP domain-containing protein. (202 aa)    
Predicted Functional Partners:
AC579_9005
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.732
AC579_9000
Uncharacterized protein.
   
 0.732
AC579_1225
Uncharacterized protein.
    
 0.546
AC579_8835
Uncharacterized protein.
   
 0.510
AC579_9728
Uncharacterized protein.
   
 0.510
AC579_4559
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.502
AC579_4100
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
 
      0.494
AC579_10374
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
    0.493
AC579_8338
Uncharacterized protein.
   
 0.452
AC579_1777
Uncharacterized protein.
   
 0.452
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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