STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_8201Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
AC579_2911
MHYT domain-containing protein.
    
 0.697
AC579_7794
Uncharacterized protein.
    
 0.663
AC579_5638
Uncharacterized protein.
    
 0.569
AC579_7558
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.550
AC579_1229
Uncharacterized protein.
    
   0.470
AC579_10137
Uncharacterized protein.
    
 0.465
AC579_3341
Uncharacterized protein.
    
   0.457
AC579_4714
Phytase-like domain-containing protein.
    
 0.438
AC579_3432
Uncharacterized protein.
    
 0.438
AC579_10316
Uncharacterized protein.
   
 0.431
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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