STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_1121Stress-response A/B barrel domain-containing protein. (111 aa)    
Predicted Functional Partners:
AC579_3675
Tryptophan synthase.
    
  0.671
AC579_2474
Pyr_redox_2 domain-containing protein.
   
 0.546
AC579_3695
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.546
AC579_5856
Pyr_redox_2 domain-containing protein.
   
 0.546
AC579_3203
Pyr_redox_2 domain-containing protein.
   
 0.546
AC579_3552
Pyr_redox_2 domain-containing protein.
   
 0.546
AC579_10245
DAO domain-containing protein.
  
 0.545
AC579_4775
DAO domain-containing protein.
  
 0.545
AC579_9659
DAO domain-containing protein.
  
 0.545
AC579_5510
DAO domain-containing protein.
  
 0.545
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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