STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_5062LisH domain-containing protein. (645 aa)    
Predicted Functional Partners:
AC579_3464
Uncharacterized protein.
   
 0.943
AC579_5847
SANT domain-containing protein.
   
 0.943
AC579_7953
Hist_deacetyl domain-containing protein.
    
 0.939
AC579_4222
Hist_deacetyl domain-containing protein.
    
 0.939
AC579_2489
Uncharacterized protein.
    
 
 0.921
AC579_1570
mRNA_triPase domain-containing protein.
   
 0.875
AC579_3740
Uncharacterized protein.
    
 0.870
AC579_8613
HORMA domain-containing protein.
   
 0.787
AC579_7577
Uncharacterized protein.
    
 0.775
AC579_1025
Uncharacterized protein.
   
 0.775
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.