STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_5014Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
AC579_10137
Uncharacterized protein.
    
 0.868
AC579_7278
Uncharacterized protein.
    
 0.627
AC579_1450
CFEM domain-containing protein.
   
 
  0.612
AC579_3375
Importin N-terminal domain-containing protein.
    
  0.566
AC579_1617
Uncharacterized protein.
    
  0.555
AC579_7682
Uncharacterized protein.
    
  0.555
AC579_3851
Uncharacterized protein.
    
  0.555
AC579_377
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.530
AC579_3985
INCENP_ARK-bind domain-containing protein.
   
 0.518
AC579_6582
Glutaredoxin domain-containing protein.
   
 0.518
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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