STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_4068Methyltransf_11 domain-containing protein. (307 aa)    
Predicted Functional Partners:
AC579_4657
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.512
AC579_1173
Bms1-type G domain-containing protein.
   
  0.500
AC579_6295
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.498
AC579_9928
Uncharacterized protein.
   
  0.495
AC579_7647
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.474
AC579_8330
40S ribosomal protein S27.
    
  0.472
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.472
AC579_6819
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.472
AC579_336
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.472
AC579_5893
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.472
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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