STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_3456Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (524 aa)    
Predicted Functional Partners:
AC579_3695
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
 
 0.995
AC579_8199
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
 
 
 0.981
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
  
 0.979
AC579_9239
Uncharacterized protein.
  
 0.978
AC579_1247
ATP-grasp domain-containing protein.
  
 0.971
AC579_3342
Flavoprotein domain-containing protein.
  
 
 0.957
AC579_8766
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.957
AC579_5032
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
 
 
 0.956
AC579_5520
Uncharacterized protein.
  
 0.955
AC579_3675
Tryptophan synthase.
 
 
 
 0.947
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.