STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_2400Uncharacterized protein. (303 aa)    
Predicted Functional Partners:
AC579_6568
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
AC579_4267
Uncharacterized protein.
   
 
 0.954
AC579_6670
Uncharacterized protein.
   
 0.936
AC579_4781
LysM domain-containing protein.
   
 
 0.892
AC579_7174
PPM-type phosphatase domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
 
      0.890
AC579_7297
WD_REPEATS_REGION domain-containing protein.
   
  0.880
AC579_3739
PINc domain-containing protein.
   
0.865
AC579_7141
Uncharacterized protein.
   
 0.862
AC579_9562
WD_REPEATS_REGION domain-containing protein.
   
 
 0.859
AC579_2059
Uncharacterized protein.
   
  
 0.826
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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