STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_4200Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
AC579_3033
UBA domain-containing protein.
    
 0.700
AC579_5783
WD_REPEATS_REGION domain-containing protein.
    
 0.508
AC579_9930
SPRY domain-containing protein.
    
 0.507
AC579_4332
Uncharacterized protein.
    
 0.491
AC579_4895
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.488
AC579_2675
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.473
AC579_5638
Uncharacterized protein.
    
 0.469
AC579_5915
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
 0.464
AC579_221
Ubiquitin-like domain-containing protein.
    
  0.461
AC579_10584
Uncharacterized protein.
    
  0.453
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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