STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_5530PX domain-containing protein. (697 aa)    
Predicted Functional Partners:
AC579_3738
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
   0.954
AC579_2089
AAA domain-containing protein.
 
      0.880
AC579_7628
Ribosomal_L18e/L15P domain-containing protein.
 
    
 0.849
AC579_4480
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.780
AC579_5911
Uncharacterized protein.
    
 
 0.760
AC579_994
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.759
AC579_5508
Uncharacterized protein.
 
      0.712
AC579_8291
Uncharacterized protein.
    
 0.691
AC579_8341
Uncharacterized protein.
    
  0.644
AC579_3976
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.634
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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