STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_6276Uncharacterized protein. (1079 aa)    
Predicted Functional Partners:
AC579_5698
Uncharacterized protein.
   
 
 0.926
AC579_1728
Uncharacterized protein.
   
 
 0.920
AC579_7231
Uncharacterized protein.
   
 
 0.915
AC579_2983
Uncharacterized protein.
   
 
 0.914
AC579_2407
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.899
AC579_4108
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.897
AC579_198
Uncharacterized protein.
   
 
 0.895
AC579_2768
Ribosomal_L2_C domain-containing protein.
   
 
 0.894
AC579_8545
Ribosomal_S7 domain-containing protein.
   
 
 0.893
AC579_5575
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.890
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.