STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_2007Uncharacterized protein. (1300 aa)    
Predicted Functional Partners:
AC579_1975
Spindle pole body component.
    
 0.728
AC579_3226
Uncharacterized protein.
    
 0.722
AC579_6429
Spindle pole body component.
    
 0.604
AC579_9945
Uncharacterized protein.
    
 0.604
AC579_2029
Phosphomevalonate kinase; Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
 
      0.595
AC579_3634
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.552
AC579_5855
Nucleoside diphosphate kinase.
    
 0.537
AC579_10079
Spindle pole body component.
    
 0.533
AC579_6386
Uncharacterized protein.
    
 0.511
AC579_6295
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.510
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.