Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AC579_1588 | AC579_1998 | A0A139HMM7 | A0A139IR33 | Thioredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.942 |
AC579_1588 | AC579_4314 | A0A139HMM7 | A0A139IR68 | Thioredoxin domain-containing protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.635 |
AC579_1588 | AC579_4319 | A0A139HMM7 | A0A139IQQ6 | Thioredoxin domain-containing protein. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.711 |
AC579_1588 | AC579_556 | A0A139HMM7 | A0A139IR95 | Thioredoxin domain-containing protein. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.949 |
AC579_1588 | AC579_6892 | A0A139HMM7 | A0A139IGK2 | Thioredoxin domain-containing protein. | Redoxin domain-containing protein. | 0.893 |
AC579_1588 | AC579_9975 | A0A139HMM7 | A0A139I4W5 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.615 |
AC579_1998 | AC579_1588 | A0A139IR33 | A0A139HMM7 | Thioredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.942 |
AC579_1998 | AC579_2874 | A0A139IR33 | A0A139IUC9 | Thioredoxin domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.807 |
AC579_1998 | AC579_3675 | A0A139IR33 | A0A139IIS6 | Thioredoxin domain-containing protein. | Tryptophan synthase. | 0.824 |
AC579_1998 | AC579_4314 | A0A139IR33 | A0A139IR68 | Thioredoxin domain-containing protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.761 |
AC579_1998 | AC579_4319 | A0A139IR33 | A0A139IQQ6 | Thioredoxin domain-containing protein. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.766 |
AC579_1998 | AC579_5258 | A0A139IR33 | A0A139IPT2 | Thioredoxin domain-containing protein. | PMSR domain-containing protein. | 0.927 |
AC579_1998 | AC579_556 | A0A139IR33 | A0A139IR95 | Thioredoxin domain-containing protein. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.938 |
AC579_1998 | AC579_6892 | A0A139IR33 | A0A139IGK2 | Thioredoxin domain-containing protein. | Redoxin domain-containing protein. | 0.796 |
AC579_1998 | AC579_9266 | A0A139IR33 | A0A139IHG5 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.898 |
AC579_1998 | AC579_9975 | A0A139IR33 | A0A139I4W5 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.840 |
AC579_2874 | AC579_1998 | A0A139IUC9 | A0A139IR33 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Thioredoxin domain-containing protein. | 0.807 |
AC579_3675 | AC579_1998 | A0A139IIS6 | A0A139IR33 | Tryptophan synthase. | Thioredoxin domain-containing protein. | 0.824 |
AC579_3675 | AC579_4319 | A0A139IIS6 | A0A139IQQ6 | Tryptophan synthase. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.776 |
AC579_3675 | AC579_9975 | A0A139IIS6 | A0A139I4W5 | Tryptophan synthase. | Uncharacterized protein. | 0.762 |
page 1 of 3