STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_5690CPSF_A domain-containing protein. (1276 aa)    
Predicted Functional Partners:
AC579_10185
Uncharacterized protein.
   
 0.999
AC579_1507
ANK_REP_REGION domain-containing protein.
   
 0.999
AC579_8146
RRM domain-containing protein.
    
 0.999
AC579_6405
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.998
AC579_6832
Matrin-type domain-containing protein.
   
 0.996
AC579_7436
Matrin-type domain-containing protein.
   
 0.996
AC579_2017
Uncharacterized protein.
    
 0.996
AC579_6343
Uncharacterized protein.
   
 0.994
AC579_8428
Uncharacterized protein.
   
 
 0.994
AC579_2092
Uncharacterized protein.
   
 
 0.990
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.