STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_9017Tr-type G domain-containing protein. (839 aa)    
Predicted Functional Partners:
AC579_9871
Ribosomal_L7Ae domain-containing protein.
  
 0.998
AC579_10386
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.998
AC579_7768
RL10P_insert domain-containing protein.
  
 0.998
AC579_1557
Ribosomal_L2_C domain-containing protein.
  
 0.998
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.998
AC579_336
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.998
AC579_7945
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.997
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.997
AC579_3163
Uncharacterized protein.
   
 0.997
AC579_9566
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.997
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.