rpmG protein (Rhizobium sp. CCGE510) - STRING interaction network

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second shell of interactors

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gene neighborhood

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Score

rpmG

COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa)

Predicted Functional Partners:

rpsN

0.998

rpmB

0.998

rplQ

0.997

rpsK

0.997

rpsH

0.997

rplX

0.997

rpsC

0.997

rpsS

0.997

rplW

0.997

rplC

0.997

Your Current Organism:

Rhizobium sp. CCGE510

NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplC	rplQ	RCCGE510_00235	RCCGE510_00110	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	COG0203 Ribosomal protein L17.	0.999
rplC	rplW	RCCGE510_00235	RCCGE510_00225	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplC	rplX	RCCGE510_00235	RCCGE510_00180	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplC	rpmB	RCCGE510_00235	RCCGE510_19453	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplC	rpmG	RCCGE510_00235	RCCGE510_00440	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rplC	rpsC	RCCGE510_00235	RCCGE510_00205	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsH	RCCGE510_00235	RCCGE510_00165	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999
rplC	rpsK	RCCGE510_00235	RCCGE510_00120	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.998
rplC	rpsN	RCCGE510_00235	RCCGE510_00170	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998
rplC	rpsS	RCCGE510_00235	RCCGE510_00215	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rplQ	rplC	RCCGE510_00110	RCCGE510_00235	COG0203 Ribosomal protein L17.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.999
rplQ	rplW	RCCGE510_00110	RCCGE510_00225	COG0203 Ribosomal protein L17.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.998
rplQ	rplX	RCCGE510_00110	RCCGE510_00180	COG0203 Ribosomal protein L17.	50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.998
rplQ	rpmB	RCCGE510_00110	RCCGE510_19453	COG0203 Ribosomal protein L17.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplQ	rpmG	RCCGE510_00110	RCCGE510_00440	COG0203 Ribosomal protein L17.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rplQ	rpsC	RCCGE510_00110	RCCGE510_00205	COG0203 Ribosomal protein L17.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplQ	rpsH	RCCGE510_00110	RCCGE510_00165	COG0203 Ribosomal protein L17.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.998
rplQ	rpsK	RCCGE510_00110	RCCGE510_00120	COG0203 Ribosomal protein L17.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.998
rplQ	rpsN	RCCGE510_00110	RCCGE510_00170	COG0203 Ribosomal protein L17.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.997
rplQ	rpsS	RCCGE510_00110	RCCGE510_00215	COG0203 Ribosomal protein L17.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999