STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT07155.1Diguanylate cyclase; COG2199 FOG: GGDEF domain. (417 aa)    
Predicted Functional Partners:
EJT04765.1
Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
0.903
EJT06608.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
0.891
EJT06685.1
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase; COG2203 FOG: GAF domain.
 
0.890
EJT05280.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
 0.889
EJT04567.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
0.865
EJT03424.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain.
 
0.865
EJT04472.1
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 0.844
EJT06126.1
PAS/PAC sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 0.813
EJT05542.1
Two-component sensor histidine kinase transcriptional regulatory protein; COG2202 FOG: PAS/PAC domain.
  
 0.791
EJT07201.1
Integral membrane sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
  
 
 0.785
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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