STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT07008.1HlyD family efflux pump protein; COG1566 Multidrug resistance efflux pump. (419 aa)    
Predicted Functional Partners:
EJT07007.1
EmrB/QacA subfamily drug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.890
EJT04195.1
NodT family RND efflux system outer membrane lipoprotein; COG1538 Outer membrane protein.
 
 0.875
EJT03909.1
EmrB/QacA subfamily drug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.774
EJT06318.1
Putative multidrug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.770
EJT04556.1
Multidrug resistance protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.741
EJT05484.1
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter; COG0841 Cation/multidrug efflux pump.
  
  0.692
EJT07303.1
COG0477 Permeases of the major facilitator superfamily.
 
     0.682
EJT06877.1
Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.680
EJT04194.1
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter; COG0841 Cation/multidrug efflux pump.
  
  0.674
EJT04564.1
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter; COG0841 Cation/multidrug efflux pump.
  
  0.673
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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