STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT06707.1COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. (365 aa)    
Predicted Functional Partners:
EJT02819.1
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 
 0.724
EJT03995.1
COG0067 Glutamate synthase domain 1.
    
 0.723
EJT06922.1
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase.
    
 0.719
EJT06275.1
Putative flavoprotein/ferredoxin; COG2258 Uncharacterized protein conserved in bacteria.
    
 0.706
EJT05517.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.701
EJT04437.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.701
EJT04271.1
COG2086 Electron transfer flavoprotein, beta subunit.
  
 
 0.564
EJT03673.1
COG2086 Electron transfer flavoprotein, beta subunit.
  
 
 0.564
EJT06708.1
Short-chain dehydrogenase/reductase SDR; COG0300 Short-chain dehydrogenases of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.539
EJT04272.1
Electron-transport flavoprotein, alpha-subunit; COG2025 Electron transfer flavoprotein, alpha subunit.
   
 
 0.440
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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