STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT06797.1GerE/LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins. (65 aa)    
Predicted Functional Partners:
EJT05280.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
 0.977
EJT06126.1
PAS/PAC sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.885
EJT04472.1
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
   
 0.885
EJT05542.1
Two-component sensor histidine kinase transcriptional regulatory protein; COG2202 FOG: PAS/PAC domain.
   
 0.861
EJT07201.1
Integral membrane sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
   
 0.856
EJT05455.1
COG0642 Signal transduction histidine kinase.
 
 
 0.841
EJT04595.1
Two-component sensor histidine kinase transcriptional regulatory protein; COG0642 Signal transduction histidine kinase.
 
 
 0.833
EJT02783.1
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
  
 0.829
EJT04311.1
LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins.
 
 0.798
EJT06798.1
Hypothetical protein; COG2826 Transposase and inactivated derivatives, IS30 family.
       0.773
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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