STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT06424.1Extracellular solute-binding protein family 5; COG0747 ABC-type dipeptide transport system, periplasmic component. (508 aa)    
Predicted Functional Partners:
EJT06426.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.983
EJT06427.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.981
EJT06289.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; overlaps another CDS with the same product name.
  
  0.799
EJT06425.1
Hypothetical protein.
       0.773
EJT06429.1
Hypothetical protein; COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase].
 
     0.755
EJT02644.1
ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.746
EJT03150.1
Transmembrane component of ABC transporter; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.732
EJT06288.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; overlaps another CDS with the same product name.
  
  0.688
EJT05865.1
Family 5 extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
  0.678
EJT04292.1
Transmembrane component of ABC transporter protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.635
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.