STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT06432.1COG2175 Probable taurine catabolism dioxygenase. (309 aa)    
Predicted Functional Partners:
EJT05091.1
COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.852
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.804
EJT06071.1
Alkanesulfonate monooxygenase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
 0.798
EJT04618.1
Binding-protein-dependent transport system inner membrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; overlaps another CDS with the same product name.
  
 
 0.792
EJT06070.1
COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
  0.767
EJT07278.1
Monooxygenase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 0.764
EJT06922.1
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase.
  
  
  0.755
EJT05214.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
  
 
 0.741
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
   
 
  0.738
EJT04987.1
COG0607 Rhodanese-related sulfurtransferase.
    
 0.733
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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