STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT06224.1Type II secretion system protein; COG2064 Flp pilus assembly protein TadC; overlaps another CDS with the same product name. (301 aa)    
Predicted Functional Partners:
EJT06223.1
Type II secretion system protein; COG2064 Flp pilus assembly protein TadC; overlaps another CDS with the same product name.
 
  
 0.987
EJT03158.1
Type II secretion system protein; COG2064 Flp pilus assembly protein TadC.
 
  
 0.947
EJT06222.1
Type II secretion system protein E; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.927
EJT03163.1
COG3745 Flp pilus assembly protein CpaB.
 
  
 0.924
EJT06221.1
COG3745 Flp pilus assembly protein CpaB.
 
  
 0.922
EJT03160.1
Response regulator receiver protein; COG0784 FOG: CheY-like receiver.
 
  
 0.879
EJT06216.1
Putative transmembrane pilus assembly protein.
 
   
 0.859
EJT06213.1
Type II secretion system protein E; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.857
EJT03159.1
Type II secretion system protein E; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.857
EJT00765.1
Conjugal transfer protein TrbB; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.839
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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