STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT06110.1Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase. (840 aa)    
Predicted Functional Partners:
EJT06089.1
Ferredoxin of the Rieseke type protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.942
EJT06063.1
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.942
EJT04768.1
Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
  0.942
EJT06109.1
COG0789 Predicted transcriptional regulators.
 
  
 0.901
EJT06922.1
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase.
    
 0.850
EJT06275.1
Putative flavoprotein/ferredoxin; COG2258 Uncharacterized protein conserved in bacteria.
    
 0.850
EJT07242.1
COG2132 Putative multicopper oxidases.
 
 
 0.845
EJT05280.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
    
 0.805
EJT06641.1
Adenylate/guanylate cyclase; COG0633 Ferredoxin.
    
 0.768
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.757
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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