STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT05974.1Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (110 aa)    
Predicted Functional Partners:
EJT05114.1
COG1076 DnaJ-domain-containing proteins 1.
  
 
 0.922
EJT05336.1
Nitrogen-fixing NifU domain-containing protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
  
 0.897
EJT05431.1
COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.891
EJT04598.1
Urea or short-chain amide ABC transporter permease; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
    
 
 0.885
EJT05394.1
Class V aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
 
 
 0.821
EJT02995.1
Scaffold protein Nfu/NifU; COG0694 Thioredoxin-like proteins and domains.
  
 
 0.744
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.743
EJT07333.1
Folate-binding protein YgfZ; COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family.
 
 
 0.706
EJT05391.1
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
  
 
 0.650
EJT05390.1
FeS assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
  
 
 0.640
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.