Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EJT03439.1 | EJT05944.1 | RCCGE510_18393 | RCCGE510_08446 | Helicase; COG0513 Superfamily II DNA and RNA helicases. | MutT/NUDIX family hydrolase. | 0.808 |
| EJT03439.1 | nnrE | RCCGE510_18393 | RCCGE510_08351 | Helicase; COG0513 Superfamily II DNA and RNA helicases. | Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.979 |
| EJT03439.1 | rnr | RCCGE510_18393 | RCCGE510_00425 | Helicase; COG0513 Superfamily II DNA and RNA helicases. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.430 |
| EJT03439.1 | rph | RCCGE510_18393 | RCCGE510_22814 | Helicase; COG0513 Superfamily II DNA and RNA helicases. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.789 |
| EJT04461.1 | EJT05944.1 | RCCGE510_14392 | RCCGE510_08446 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | MutT/NUDIX family hydrolase. | 0.808 |
| EJT04461.1 | nnrE | RCCGE510_14392 | RCCGE510_08351 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.979 |
| EJT04461.1 | rnr | RCCGE510_14392 | RCCGE510_00425 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.446 |
| EJT04461.1 | rph | RCCGE510_14392 | RCCGE510_22814 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.789 |
| EJT05280.1 | EJT05944.1 | RCCGE510_08625 | RCCGE510_08446 | Hypothetical protein; COG2202 FOG: PAS/PAC domain. | MutT/NUDIX family hydrolase. | 0.725 |
| EJT05280.1 | nadE-2 | RCCGE510_08625 | RCCGE510_09720 | Hypothetical protein; COG2202 FOG: PAS/PAC domain. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.470 |
| EJT05280.1 | ribB | RCCGE510_08625 | RCCGE510_19959 | Hypothetical protein; COG2202 FOG: PAS/PAC domain. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.874 |
| EJT05313.1 | EJT05944.1 | RCCGE510_08790 | RCCGE510_08446 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | MutT/NUDIX family hydrolase. | 0.808 |
| EJT05313.1 | nnrE | RCCGE510_08790 | RCCGE510_08351 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.979 |
| EJT05313.1 | rnr | RCCGE510_08790 | RCCGE510_00425 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.446 |
| EJT05313.1 | rph | RCCGE510_08790 | RCCGE510_22814 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.789 |
| EJT05404.1 | EJT05944.1 | RCCGE510_09245 | RCCGE510_08446 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | MutT/NUDIX family hydrolase. | 0.808 |
| EJT05404.1 | nnrE | RCCGE510_09245 | RCCGE510_08351 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.979 |
| EJT05404.1 | rnr | RCCGE510_09245 | RCCGE510_00425 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.446 |
| EJT05404.1 | rph | RCCGE510_09245 | RCCGE510_22814 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.789 |
| EJT05944.1 | EJT03439.1 | RCCGE510_08446 | RCCGE510_18393 | MutT/NUDIX family hydrolase. | Helicase; COG0513 Superfamily II DNA and RNA helicases. | 0.808 |
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