STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT05031.1AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (267 aa)    
Predicted Functional Partners:
EJT03995.1
COG0067 Glutamate synthase domain 1.
    
  0.700
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.699
EJT06190.1
COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
   0.667
EJT05032.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.624
EJT05030.1
COG3231 Aminoglycoside phosphotransferase; Belongs to the aminoglycoside phosphotransferase family.
       0.590
EJT05033.1
B3/4 domain-containing protein.
       0.568
EJT05029.1
Hypothetical protein.
       0.564
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.549
EJT04813.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.451
EJT04317.1
COG0147 Anthranilate/para-aminobenzoate synthases component I.
     
 0.438
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.