STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT04306.1COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components. (318 aa)    
Predicted Functional Partners:
EJT04304.1
Choline ABC transporter ATP-binding protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.999
EJT04305.1
COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.998
EJT05632.1
Substrate-binding region of ABC-type glycine betaine transporter; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
     
  0.777
betI
Transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
 
     0.744
EJT05479.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
  
 0.580
EJT02891.1
Component of ABC transporter; COG1174 ABC-type proline/glycine betaine transport systems, permease component.
 
 
 0.526
EJT02889.1
COG1174 ABC-type proline/glycine betaine transport systems, permease component.
 
 
 0.511
tdk
COG1435 Thymidine kinase.
       0.503
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.477
EJT02888.1
Glycine/betaine ABC transporter substrate-binding protein; COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
   
 
 0.467
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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