STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJT03787.1Putative cytoplasmic protein; COG3820 Uncharacterized protein conserved in bacteria. (234 aa)    
Predicted Functional Partners:
rpmI
COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
 
    0.786
EJT04856.1
COG3814 Uncharacterized protein conserved in bacteria.
  
   
 0.775
EJT04112.1
COG3750 Uncharacterized protein conserved in bacteria; Belongs to the UPF0335 family.
  
   
 0.769
EJT03766.1
Import inner membrane translocase subunit Tim44; COG4395 Uncharacterized protein conserved in bacteria.
  
     0.769
EJT03748.1
Double-strand break repair protein AddB; COG3893 Inactivated superfamily I helicase.
  
     0.731
EJT03749.1
ATP-dependent UvrD family DNA helicase; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
  
     0.727
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.714
EJT03225.1
COG1396 Predicted transcriptional regulators.
  
     0.702
EJT06165.1
COG1396 Predicted transcriptional regulators.
  
     0.697
EJT04701.1
COG1396 Predicted transcriptional regulators.
  
     0.693
Your Current Organism:
Rhizobium sp. CCGE510
NCBI taxonomy Id: 1132836
Other names: R. sp. CCGE 510, Rhizobium sp. CCGE 510
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.