STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332235_02303Unannotated protein. (197 aa)    
Predicted Functional Partners:
GCA_000332235_00161
Unannotated protein.
  
     0.729
GCA_000332235_04030
Unannotated protein.
  
     0.702
GCA_000332235_00186
Unannotated protein.
  
     0.577
GCA_000332235_00554
Unannotated protein.
  
     0.544
GCA_000332235_00284
Unannotated protein.
  
     0.525
GCA_000332235_00553
Unannotated protein.
  
     0.525
GCA_000332235_00265
Unannotated protein.
  
     0.485
GCA_000332235_02302
Unannotated protein.
       0.478
GCA_000332235_03020
Unannotated protein.
  
     0.466
GCA_000332235_00409
Unannotated protein.
  
     0.457
Your Current Organism:
Geminocystis herdmanii
NCBI taxonomy Id: 113355
Other names: G. herdmanii PCC 6308, Geminocystis herdmanii PCC 6308, Gloeocapsa alpicola CALU 743, Synechocystis sp. ATCC 27150, Synechocystis sp. ATCC 27267, Synechocystis sp. PCC 6308
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.