STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM81309.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
KRM89087.1
Protein-n(pi)-phosphohistidine--sugar phosphotransferase.
  
 
 0.954
KRM89505.1
PTS family porter.
  
 
 0.954
KRM85211.1
Hypothetical protein.
  
 
 0.954
KRM89317.1
PTS system, trehalose-specific IIBC component.
  
 
 0.954
KRM89318.1
Trehalose PTS II ABC.
  
 
 0.954
KRM86459.1
Fructose PTS, EIIABC.
   
 
 0.925
KRM84515.1
Fructose family permease EIIC subunit 2.
   
 
 0.925
KRM89134.1
PTS system sucrose-specific transporter subunit EIIBC.
  
 
 0.853
KRM85021.1
PTS family mannose porter, IIAB component.
   
 
 0.801
KRM89084.1
Fructokinase branched chain amino acid 2-keto-4-methylthiobutyrate aminotransferase.
  
 
 0.656
Your Current Organism:
Lactobacillus vini
NCBI taxonomy Id: 1133569
Other names: L. vini DSM 20605, Lactobacillus sp. CECT 5924, Lactobacillus sp. DSM 20605, Lactobacillus vini CECT 5924, Lactobacillus vini DSM 20605, Lactobacillus vini str. DSM 20605, Lactobacillus vini strain DSM 20605
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