STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM88538.1ABC-type proline glycine betaine transport system, ATPase component. (391 aa)    
Predicted Functional Partners:
KRM88535.1
Binding-protein-dependent transport systems inner membrane component.
 0.999
KRM88536.1
Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 0.999
KRM88537.1
Glycine betaine carnitine choline ABC transporter, permease protein.
 0.999
KRM87038.1
ABC transporter, permease protein.
 
      0.883
KRM89059.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
      0.827
KRM88534.1
Cation transport ATPase.
       0.520
KRM89588.1
ABC transporter.
 
     
0.489
KRM88939.1
Sugar ABC transporterATPase.
  
  
 
0.441
KRM88539.1
Hypothetical protein.
       0.430
KRM89078.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.423
Your Current Organism:
Lactobacillus vini
NCBI taxonomy Id: 1133569
Other names: L. vini DSM 20605, Lactobacillus sp. CECT 5924, Lactobacillus sp. DSM 20605, Lactobacillus vini CECT 5924, Lactobacillus vini DSM 20605, Lactobacillus vini str. DSM 20605, Lactobacillus vini strain DSM 20605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.